PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_004509135.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 238aa    MW: 27072.2 Da    PI: 10.4305
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_004509135.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.21.4e-08144184954
                     HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                      r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  XP_004509135.1 144 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 184
                     699*****************87.....8****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088815.434135184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.104.3E-14136193IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-14139194IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003537.0E-14141190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000106.7E-6145184IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000833.16E-6158189No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 238 aa     Download sequence    Send to blast
MDVEILKSSV GSMDMISMMM QMEKFPNSQF NTEQPFYNTV PLFNQNIALS SSPPPSFNID  60
PLLIHSNLNF NTIQQQPLEQ TSLSFPYSSD NNKNSNNKKN SMATMREMIF RMAVMQPIHI  120
DPESIRPPKR RNVKISKDPQ SVAARHRRER ISERIRILQR LVPGGTKMDT ASMLDEAIHY  180
VKFLKKQVQT LEQVGANRSN MNGGSSLMNN FNVNYSGFMM KGCQPFQMVG SASKQLLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1125130RPPKRR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004509135.11e-175PREDICTED: transcription factor HEC1
SwissprotQ9SND47e-51HEC2_ARATH; Transcription factor HEC2
TrEMBLA0A0L9TJV64e-74A0A0L9TJV6_PHAAN; Uncharacterized protein
TrEMBLA0A0S3R4K74e-74A0A0S3R4K7_PHAAN; Uncharacterized protein
STRINGGLYMA01G39360.29e-65(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF65134141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.12e-42bHLH family protein